Question: GRCh37 -> GRCh38 alternative loci index conversion
gravatar for lefthandgergo
2.7 years ago by
lefthandgergo10 wrote:

Hi there!

I'd like to find alternative loci sections (eg. chr6_cox_hap2) of the GRCh37 human reference genome in GRCh38. I've already found some tools to perform position conversions between the two assemblies (LiftOver and NCBI Remap), but not for these alternative sequence names. Do you have any idea how to solve this problem? Thanks!


reference genome bam assembly • 999 views
ADD COMMENTlink written 2.7 years ago by lefthandgergo10
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1054 users visited in the last hour