Question: (Closed) How to count positively and negatively aligned reads in a bam file?
gravatar for MAPK
2.4 years ago by
MAPK1.6k wrote:

I have a bam file and I would like to count the number of plus and minus strand aligned tothe reference sequence. How can I get this data from a bam file? Thanks for your help in advance.

bam • 674 views
ADD COMMENTlink written 2.4 years ago by MAPK1.6k

Hello MAPK!

Questions similar to yours can already be found at:

We have closed your question to allow us to keep similar content in the same thread.

If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.


PS: Answers in the other thread should help you.

ADD REPLYlink modified 2.4 years ago • written 2.4 years ago by RamRS28k
Please log in to add an answer.
The thread is closed. No new answers may be added.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1557 users visited in the last hour