I had tried to analyze the mRNA alternative splicing situation with a reported tool, named rMATs. But I was stuck when I try to test this tool following its tutorial which is posted in http://rnaseq-mats.sourceforge.net/user_guide.htm,and the test line is :
/software/biosoft/software/python2.7.2/bin/python2.7 rMATS-turbo-Linux-UCS2/rmats.py --b1 b1.txt --b2 b2.txt --gtf gtf/Homo_sapiens.Ensembl.GRCh37.72.gtf --od bam_test -t paired --readLength 101 --cstat 0.0001 --libType fr-unstranded
but quickly I got this error :
Traceback (most recent call last): File "rMATS-turbo-Linux-UCS2/rmats.py", line 17, in <module> from rmatspipeline import run_pipe ImportError: libpython2.7.so.1.0: cannot open shared object file: No such file or directory
I really don't know how to fix this. I will be deeply appreciate it if you can give me some advice. Thanks!!!