Question: Locus_tag mapping between organisms based on homology
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Benni • 20 wrote:
I basically have two related genomes with their respective locus tag list. Given the locus_tag of organisms 1, I want to find the closest (most homologe) locus_tag available in organisms 2. Including a qualitative measurement of the homology to filter the data. I would prefer homology based on protein level, but DNA level would be ok too. Since, the prokaryotic genomes are very closely related, there should be an obvious homolog for most genes. Do you know a tool, scipt, etc. for that?
