Question: short sequence alignment to short sequence
0
gravatar for xzpgocxx
12 months ago by
xzpgocxx0
xzpgocxx0 wrote:

Hi,

I have many short sequences (60bp) and want to alignment to the short reference sequence (also is 60bp) to get the different alignment types. I have to try blast to do this work and output m8 format to get the mismatches and gap value. But It's not enough and I'm interested abundant information.

So, what software can instead the blast to do the alignment?

Thanks.

alignment sequence • 241 views
ADD COMMENTlink written 12 months ago by xzpgocxx0
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