Question: falcon unzip output
0
gravatar for rob234king
11 days ago by
rob234king550
UK/Harpenden/Rothamsted Research
rob234king550 wrote:

I have had errors getting falcon unzip to work on a pacbio assembly but believe I have got to an end by launching jobs manually. I had to change one of the scripts as -mum for nucmer was an option when should have been --mum and was causing an error (I did post on github about this).

What I think are the final files are below. The documentation is sparse and don't usually respond to queries. Can anyone confirm this is final for unzip and what the files are?

all_h_ctg_edges
all_h_ctg_ids
all_p_ctg.fa
asm.gfa all_h_ctg.fa
all_p_ctg_edges
all_phased_reads
sg.gfa

pacbio falcon • 64 views
ADD COMMENTlink written 11 days ago by rob234king550
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 708 users visited in the last hour