Question: How do you plot secondary structure like PDB?
0
gravatar for UnivStudent
6 days ago by
UnivStudent360
Canada
UnivStudent360 wrote:

Does anyone know the software PDB uses to draw the chain's secondary structure (DSSP line)? Or any other programs that can draw the same type of diagrams programatically?

Sequence_Chain_View

ADD COMMENTlink modified 6 days ago by jrj.healey4.2k • written 6 days ago by UnivStudent360
1
gravatar for jrj.healey
6 days ago by
jrj.healey4.2k
United Kingdom
jrj.healey4.2k wrote:

I'm not sure what PDB uses specifically, but you can get very similar results with ESpript. I think you usually use the output files of something like DSSP to dictate where the secondary structure lies, and then tools like ESpript render it on to the sequence.

ADD COMMENTlink written 6 days ago by jrj.healey4.2k
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