n50 contig with pacbio nowadays ?
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6.4 years ago
Picasa ▴ 650

Hi,

I am looking for that kind of picture :

https://www.pacb.com/wp-content/uploads/2014/02/fig1-1024x422.png

but it's a it outdated. Do you have something similar for 2017-2018 ?

Thanks for your help.

n50 pacbio • 1.1k views
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Don't know whether this type of diagram is available for year 2017-2018. But if you have the latest information to show, then definitely you can prepare a similar type of diagram using draw.io

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Well outdated, these are just examples of genome assembly projects that have been performed. As sequencing technology and assemblers improves this contig N50 will increase accordingly. You'll probably have to dive into the literature to get metrics on recent assemblies.

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