Question: conserved protein finding
gravatar for luyang1005
8 months ago by
luyang100520 wrote:

Hi, community,

I am analyzing the shotgun metagenomics data. I have got the scaffolds from the assembly. And I have got the protein hits to Pfam database. Since some papers mentioned that use conserved protein to predict taxonomy, which could be more reliable. May I know how to get the conserved protein? Any software and database suggestion? Does anyone have some suggestions? Thanks in advance.

assembly genome • 172 views
ADD COMMENTlink written 8 months ago by luyang100520
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