I'm new to Kraken and I'm trying to do a standard Database. I've been trying to use Kraken with my server using a .sbatch file. My .sbatch file is as follows:
#!/bin/bash module load jellyfish/1.1.11 module load kraken/1.1 kraken-build --standard --threads 24 --db SampleKraken
But, running it just ends up as a failure job and it shows the following text in the .out file:
The following have been reloaded with a version change: 1) jellyfish/1.1.11 => jellyfish/2.2.6 Found jellyfish v2.2.6 Kraken requires jellyfish version 1
I don't know why is it switching if I am loading the correct Jellyfish version.
Any idea on how to solve this?
Thanks for any answer you could give me.