Combined miRNA Target Prediction Algorithms for Custom Datasets/Species
0
0
Entering edit mode
3.0 years ago
underasail • 0

I'm looking to run miRNA target prediction analysis on a miRNA dataset in an aphid species. I'd love to be able to use one of the programs that combine MiRanda, PITA, RNAHybrid, etc.; however, they all seem to only be available for select species: human, mouse, fly, and maybe more.

Are there any that will allow me to submit a custom miRNA dataset and run it against any genome?

Even if there was a tool to make comparing the outputs of these programs easier, I'd appreciate that. I don't have any experience with SQL Databases that people seem to use for this.

miRNA target prediciton • 652 views
ADD COMMENT

Login before adding your answer.

Traffic: 2251 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6