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• Clustering with RNA-Seq data and perturbation score
  Hello, everyone I have some questions about RNA-seq clustering and perturbation score. My purpo...
• Perturbation Cancer cell line data
  Hi all, I was wondering if anybody new of a database of perturbation experiments in cancer cell...
• Somatic mutations from RNA-Seq data of tumor vs. normal
  Hi, I have RNA-Seq data from a "control" cell line and the same cell line in which a an oncogeni...
• MCF-7 Cell Line DNA Sequence Data
  Hi, We are planning to analyze some cancer cell lines for variants such as mutations, gene fusion...
• How To Differentiate Driver Mutations From Common Mutations And Snps In Cancer Rna-Seq Data
  Hi all, I am working on RNA-seq data ( our own experimental data) for some cancer types of human...
• Drug target in specific cancer database
  I am looking for a drug targets for cancer mutation database. My aim is to find genes that are re...
• RNA-Seq database of cancer patients other than TCGA and ICGC?
  For my computational cancer model using RNA-Seq data, I am going to use TCGA as a discovery cohor...
• A Personalized, Precise Approach to Fighting Cancer
  Cancer is the second major cause of mortality in the United States and targeted cancer therapies ...
• Downloading RNA Seq Data for Prostate Cancer Cell LInes
  Hello Colleagues, I need to download RNA Seq data for prostate cancer cell lines like DU145 and P...
• How to get the differentially expressed genes in cancer cell lines
  I'm wondering is there a way to calculate the differentially expressed genes in cancer cell lines...
• how to detect mutation from viral RNA-seq data
  Hi All, I have developed a persistent infection (PI) on cancer cells using NDV and then we seque...
• RNA-Seq database for immune cells
  Hi all, I'm wondering is there any database/datasets that have pure immune cell lines' RNA-Seq da...
• Cancer cell line WGS
  I am looking for WGS data (fastq or bam files) for some of the commonly used cancer cell lines. I...
• Where to find DNase-seq and RNA-seq assays for various cancer lines?
  Does anyone know where to find DNase-seq or/and RNA-seq assays of different cancer cell lines (no...
• Looking For Rna-Seq Data Sets Of Breast Cancer Or Liver Cancer.
  I'm trying to get RNA-seq patient data for breast cancer or liver cancer. I know encode has RNA-s...
• find out whether cell lines are verified
  I have a list of about 1000 cancer cell lines with associated RNA-seq expression profiles per gen...
• Rna-Seq Cancer Cell Line, Hg19 Or Cancer Cell Line Genome?
  Just curious, I never worked with cancer data before and I was wondering if it's not recommended...
• What are the advantages of using cell-lines over tissue samples of RNA-seq data ?
  Hi, I am working on the cancer samples, it includes the both cell-line samples as well as tissue...
• How To Find Rna-Seq Data Of Published Papers?
  where can one find RNA-seq data of published papers? The following three papers have large RNA-se...
• Looking for small RNA-seq in single cell
  Hey, I'm looking database that contains small RNA-seq for single cell. Is there any resource to...
• p53 upregulated in cancer cell line
  Hello all, So, I found  a strange data from my RNA-seq analysis. I found that p53 is upregulated...