I am trying to run OMA as a standalone program with Espirit enabled. I get the following error message:
Reading 4761692 characters from file Cache/DB/Str01_Jun18_Spades.db Pre-processing input (DNA) 89 sequences within 89 entries considered Creating file Cache/DB/Str01_Jun18_Spades.db.map for mapping Building new Pat index in file Cache/DB/Str01_Jun18_Spades.db.tree with 4756132 entries Pat index with 4756132 entries sorted, from "A</SEQ></E>\n<E><ID>" to "XXXXXXXXXXXXXXXXXXX" 1533645354.662245 - 1 - [pid 14006]: Computing Pseudomonas_1W1-1A vs Pseudomonas_sp_R2A2 (Part 1 of 1) Mem: 0.399GB Error, 'sequence 1 is too long'
Does anybody know what can be done to fix this? Thanks