Question: Software for genome coordinates from alignment
0
gravatar for tim.ivanov.92
11 days ago by
tim.ivanov.920 wrote:

Is there a package/software (preferably python) for coordinate conversation from alignment to genome?

For example i've done tblastx of a reference protein and obtained a number of alignments. Is it possible now to easily do any of these things:

1). Get coordinates of specific exons from reference protein, inside all my alignments?

2). Get genomic coordinates inside target organism (whichever it) is of these exons?

alignment gene genome • 142 views
ADD COMMENTlink modified 11 days ago • written 11 days ago by tim.ivanov.920
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1457 users visited in the last hour