Question: Software for genome coordinates from alignment
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gravatar for tim.ivanov.92
4 months ago by
tim.ivanov.9210 wrote:

Is there a package/software (preferably python) for coordinate conversation from alignment to genome?

For example i've done tblastx of a reference protein and obtained a number of alignments. Is it possible now to easily do any of these things:

1). Get coordinates of specific exons from reference protein, inside all my alignments?

2). Get genomic coordinates inside target organism (whichever it) is of these exons?

alignment gene genome • 225 views
ADD COMMENTlink modified 10 weeks ago by Biostar ♦♦ 20 • written 4 months ago by tim.ivanov.9210
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