Check CNV analysis from CNVnator
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5.7 years ago
Tania ▴ 180

Hi every one

I used CNVnator to get a CNV list for each patient sample using exome (not sure if ok) and whole genome whatever I have. I pick those with ev2 <0.05 from CNVnator.

Then I use the genome browser to find the genes that map to these CNVs intervals, and also find out if these CNVs overlap with pathogenic CNVs or not. Then I pick the genes that overlap with my CNVs and pathogenic CNVs and see if those genes could be related to the phenotype I am studying.

Is this wrong? Any helpful reference or suggestions are welcome as it is my first time.

Thanks

CNV exome whole genome • 1.2k views
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