Question about Coverage and identity for a good prediction of Pan-proteome

Question

[kamel]

Dear colleagues,

I want to predict the pan-proteome on 25 strains of the same species (each strain contains more than 9000 proteins). I want to know what are the values (%) of coverage and identity to use for a good prediction of Pan (Core and accessory) ??

For information I used proteinortho.

Looking forward to your answers

Best regards