Question: mm10 phyloP download for custom tracks
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gravatar for rbronste
5 months ago by
rbronste240
rbronste240 wrote:

Im trying to find/download the phyloP information so I can use it in some custom track display tools, however most of the files (bigwig) on UCSC are many gb in size, wondering if there is another file type good for displaying the base wise conservation external to UCSC?

ucsc phylop conservation • 289 views
ADD COMMENTlink modified 5 months ago by Biostar ♦♦ 20 • written 5 months ago by rbronste240
2

May be you can use per-chromosome files that UCSC provides here: http://hgdownload.soe.ucsc.edu/goldenPath/mm10/phyloP60way/mm10.60way.phyloP60way/ NCBI Genome Data Viewer also has these data: https://www.ncbi.nlm.nih.gov/genome/gdv/browser/?cfg=NCID_1_26598921_130.14.22.10_9146_1540569262_189464536 For more options, go to Tracks > Configure Tracks > Comparative Genomics

ADD REPLYlink written 5 months ago by vkkodali1.1k
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