Question: mm10 phyloP download for custom tracks
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gravatar for rbronste
13 months ago by
rbronste300
rbronste300 wrote:

Im trying to find/download the phyloP information so I can use it in some custom track display tools, however most of the files (bigwig) on UCSC are many gb in size, wondering if there is another file type good for displaying the base wise conservation external to UCSC?

ucsc phylop conservation • 476 views
ADD COMMENTlink modified 12 months ago by Biostar ♦♦ 20 • written 13 months ago by rbronste300
2

May be you can use per-chromosome files that UCSC provides here: http://hgdownload.soe.ucsc.edu/goldenPath/mm10/phyloP60way/mm10.60way.phyloP60way/ NCBI Genome Data Viewer also has these data: https://www.ncbi.nlm.nih.gov/genome/gdv/browser/?cfg=NCID_1_26598921_130.14.22.10_9146_1540569262_189464536 For more options, go to Tracks > Configure Tracks > Comparative Genomics

ADD REPLYlink written 13 months ago by vkkodali1.6k
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