**100**wrote:

Hi all,

I'm trying to calculate Tajima's D with vcftools parameter --TajimaD 5000 and I wonder whether there is another parameter that allows to calculate it in sliding windows. I've seen that there is something similar to calculate pi (--window-pi and --window-pi-step) and fst (--fst-window-size and --fst-window-step).

Any help will be appreciated, thanks in advance!