chimeric transcripts detection tool

Question

[amitpande74]

Hi, I want to analyze RNAseq data for detecting Chimeric transcripts. Which tool would be best to use. I am aware of some from here Nature. Kindly help.

thanks.

[michael.ante]

I know, that there's STAR-Fusion. But I don't know how it compares to the other mentioned tools.

Cheer,

Michael

Answer 1

[enxxx23]

FusionCatcher https://sourceforge.net/projects/fusioncatcher/