I am running the last round in Maker for the annotation of my genome with trained Augustus, SNAP and tRNAscan. The process has advanced well but it has taken a while. I have checked the final_master_datastore_index.log file (final is the name of the round) and shows that all the chromosomes and sequences have ended without any error, my concern now is because Maker is still running and I do not know if can I stop it or not. Does anyone have an idea of what may be happening?
Thank you in advance!