Question: Identifying consensus sequence between multiple Arabidopsis genome sequences
3 months ago by
bioinforesearchquestions • 200
bioinforesearchquestions • 200 wrote:
I have a list of Arabidopsis full genome sequence in FASTA format. I am planning to align against each of them and find
- Consensus sequence
- Genomes aligned to the consensus sequence with highlighted SNPs, indels and presence-absence variations
any suggestions (articles, tutorial, etc) to proceed further.
Can I use CLUSTALW or MUSCLE?
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