Question: SPANR result interpretation
0
gravatar for nkausthu
14 months ago by
nkausthu20
nkausthu20 wrote:

Hi,

I have an intronic variant which lies ~70bp upstream of an exon and I have used splicing-based Analysis of Variants (SPANR) to know the impact of a an intronic variant. Unfortunately, I am unable to interpret the results given and not able to find any tutorial regarding the tool. It would be really great if someone can give suggestions on this or suggest any other tools which can be used for the same (other than mutationtaster, HSF, Intsplice,Netgene2). Thank you

ADD COMMENTlink modified 14 months ago by Kevin Blighe55k • written 14 months ago by nkausthu20
0
gravatar for Kevin Blighe
14 months ago by
Kevin Blighe55k
Porto Alegre / London
Kevin Blighe55k wrote:

You have not pasted the results here, so, nobody can comment. If you must use SPANR, then consider contacting the author(s) of the program.

I list some other splice predictors here:

ADD COMMENTlink written 14 months ago by Kevin Blighe55k
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