I am using Parsnp to extract all the core geome SNPs from my bacterial genomes. Here is the command line
./parsnp -g ref/PAO1.gbk -d Parsnp/ -p 8 -c -o Output/. But I got a error like this
Traceback (most recent call last): File "<string>", line 624, in <module> NameError: name 'nameok' is not defined
I don't know how to clear this error. Can anyone help me. Thanks in advance.