Question: Parsnp Error. Why?
0
gravatar for k.kathirvel93
14 months ago by
k.kathirvel93250
India
k.kathirvel93250 wrote:

Hi EveryOne, I am using Parsnp to extract all the core geome SNPs from my bacterial genomes. Here is the command line ./parsnp -g ref/PAO1.gbk -d Parsnp/ -p 8 -c -o Output/. But I got a error like this

Traceback (most recent call last):
  File "<string>", line 624, in <module>
NameError: name 'nameok' is not defined

I don't know how to clear this error. Can anyone help me. Thanks in advance.

ADD COMMENTlink modified 14 months ago • written 14 months ago by k.kathirvel93250
1

Hello k.kathirvel93 ,

how have you installed parsnp? Have it worked before?

ADD REPLYlink written 14 months ago by finswimmer13k

Hi finswimmer, I have downloaded the .tar package directly from the official page.

ADD REPLYlink written 14 months ago by k.kathirvel93250

Can anyOne answer/Help this ?

ADD REPLYlink written 14 months ago by k.kathirvel93250
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