Hello!, I am trying to parse some results given by HMMER and in the tblout file I was able to isolate the matches I want.
Nonetheless, the same value is being repeated several times if it matches to just one profile.
For example, this is one read is repeated 3 times:
SRR6033660.161030 FAM007172 4e-15 4.2e-15 63.4 63.4 SRR6033660.1458607 FAM019859 2.5e-12 2.7e-12 55.0 54.9 SRR6033660.1458607 FAM015326 4e-14 4.2e-14 58.8 58.7 SRR6033660.1458607 FAM000764 7.5e-25 8.1e-25 94.6 94.5
It matches to 3 families, nonetheless I just want to select the row which has the lowest e-values (3rd and 4th columns)
How can I write an awk command that gives me this output?
SRR6033660.161030 FAM007172 4e-15 4.2e-15 63.4 63.4 SRR6033660.1458607 FAM000764 7.5e-25 8.1e-25 94.6 94.5