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• Two color microarray Heatmap
  Hello Biostars I wish to plot a heatmap from a two color microarray data. The experiments used a ...
• Heatmap With Pathway
  Hi, I am trying to do a Heatmap from metabolomics data with pathways. I want to show groups of m...
• How To Label The Value On The Heatmap Without Scientific Notation Using Gitools
  Hi all, Really fantastic tool for heatmap visualization. The latest version 2.00 can show value ...
• Annotating gene clusters in a heatmap with GO enriched terms
  Hi, Can anyone recommend and R package that is able to perform a GO analysis on gene clusters pr...
• How to plot the heatmap of gene expression for very large data set ?
  Hi, I have gene expression matrix from NGS data. it's around 30000 genes and 1000 samples. I wa...
• How Do I Draw A Heatmap In R With Both A Color Key And Multiple Color Side Bars?
  I often use heatmap.2 {gplots} because of its many improvements/options over the standard heatmap...
• How to compute scale bar of the dendrogram for heatmap using heatmap2 ?
  Hi, I have created a heatmap for the genes expression across different samples. I need to comput...
• Cut one subcluster from heatmap and then paste it using R
  Hello Sir/madam, I have total 304 DEG and i have clustered them using hclust and heatmap.2 is us...
• extraction of subcluster from a hclust object in the form of matrix to plot a heatmap
  Hello Sir/madam, I m using heatmap.2 function from gplots package of R to plot the heatmap of DE...
• Row label in heatmap
  I have data frame like this about 250 gene i taking a small subset of it gene `WT` ...
• yes, I probably do not quite understand heatmap
  Hi Biostars, I recently read a post on heatmap by Mick Watson https://biomickwatson.wordpress.co...
• Annotating DEG Heatmap by Go terms
  Hello, I have a heatmap of DEG , the data is microarray data, i have used ComplexHeatmap for the...
• How can I associate specific colors to specific data for the color bar in heatmaps in R?
  HI All, I'm fairly in new with R, so any help is much appreciated. I'm in the process of making ...
• Key With Heatmap
  Hi, I am making heatmaps using R. The heatmap function in R does not support a key with the heat...
• How to add FPKM values in cells of heatmap?
  Dear All, I want to add FPKM values into cells of heatmap using complex heatmap package. I made ...
• How To Plot A 'Longer' Heatmap Using R?
  Hi, I try to plot a heatmap for 200*40 matrix. But the heatmap function output a figure without c...
• An Interactive Heatmap For Viewing Expression Data Matrices
  I have a matrix of expression data (rows -- genes, cols -- samples) that I want to view as a heat...
• How To Generate Heatmap With Multiple Sidebars From Dataset In Format Of .Csv Using Heatmap.3
  I find an example here using heatmap.3 function to generate heatmap with multiple sidebars. But t...
• Heatmap for RNA-Seq data
  I'm trying to generate a heatmap for almost 15,000 genes expression data across different samples...
• Saving individual clusters from heatmaps
  I am doing a gene based clustering ,while doing so i set of genes that are cluster together ,how ...
• R: Heatmap Of Rna-Seq Count Table With Functional Gene Clustering
  I would like to prepare a heatmap of differentially expressed genes from an RNA-seq experiment wi...