Training in Data Integration, Analysis and Visualization
National Institutes of Health
9000 Rockville Pike
Bethesda, MD 20892, USA
Data integration is a big problem in biomedical research, especially in the era of NGS data, BigData, “omics”, precision medicine etc. Network based approach is one of the interesting and efficient ways to integrate data. This hands-on training will introduce participants to network concepts, data preparation and integration methods, data analysis, exploration and visualization using Cytoscape and other open source tools. The training also includes a one day Bring-Your-Own-Data* clinic.
Hands-on Skills/Tools taught
- Data Cleaning and Preparation: Basic Unix
- Data Cleaning and Preparation: OpenRefine
- Network Generation: Cytoscape
- Data Integration: Cytoscape
- Enrichment analysis: Cytoscape
- Pathway analysis: Cytoscape
- Gene Prioritization: Cytoscape
- Data Exploration: Cytoscape
- Data Visualization: Cytoscape
- Large Graph Analysis: Neo4J
- Training provided by NIH researchers active in network based research
- Cookbook style bound manual for all exercises
- Direct, after training support through exclusive forum membership
- Continuing Education Credits
- Bring-Your-Own-Data* : we will help you build your own networks, integrate, analyze, visualize and explore your own data. You can take home a good amount of work done and saved as a complete sessions file.
- If Participants don't have their own data for the BOYD clinic, we will provide a customized Do-It-Yourself exercise based on the input we would collect on the first day of the training.
For more information and registration, please visit the following page;