Transcription Factor Enrichment Analysis
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2.6 years ago
shruthih • 0

Is there some some tools to detect enrichment of transcription factors from microarray/RNAseq data? I have data sets from mouse and c.elegans

RNA-Seq transcription factors • 822 views
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You mean genes encoding for transcription factors enriched in your differentially-expressed genes? If not, please elaborate.

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Yes - Tools to detect genes encoding for transcription factors from microarray/RNAseq data?

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It's still not really clear what you want. Why can't you just do a standard differential expression analysis and pull out transcription factor genes from a list afterwards? Or are you trying to actually show that transcription factor genes are enriched in your differentially expressed gene set, as ATpoint said?

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