Question: View MAF file and the reference sequence in a genome viewer/annotator along with SAM/BAM?
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gravatar for DanielC
7 weeks ago by
DanielC80
Canada
DanielC80 wrote:

Dear Friends,

I am using GenomeView to visualize these contents.

SAM file with reads mapped onto the assembled contig

MAF file with 20 blast hits of the assembled contig

And, Reference assembled contig

I have been trying to visualize these all together in Genomeview but not successful. Can someone please let me know how can I visualize these all together in Genomview or a viewer or gene annotator? Is it possible to visualize all these together? I am trying to manually curate my gene annotations. I would really appreciate.

Thanks

sam bam viewer maf • 119 views
ADD COMMENTlink modified 7 weeks ago • written 7 weeks ago by DanielC80
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