I Have 5 P.aeruginosa Complete NGS whole genome data and I am trying predict smallRNAs from it. The raw data was assembled and annotated. Already I tried BSRD I got 80 smallRNAs but the database was updated very long back. So, now I trying manually, till now I have extracted intergenic regions from annotated gbk files followed by RHO-terminator seq filter. What i can do more to comeup with the best hits of smallRNAs. Thanks in advance.