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5.0 years ago
yasmint
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Hi everyone,
I am working on gonadal transcriptimes in lamprey. Two reference genomes are available for the species. There are differences in the number of genes in two assemblies but the annotations are poor. I want to find out which genes are expressed in my sample but missing in one of the genomes. How can I do that? I would really appreciate your suggestions.
Thanks, Tamanna
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- Make a list of genes from annotations, unique to each assembly
- Intersect the differentially expressed gene list with these two lists.
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5.0 years ago by
cpad0112
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