Question: Supernova run 1kb+ min scaffold
1
gravatar for catto.michael
21 months ago by
catto.michael20 wrote:

Hi,

Does anyone know what flag to use to set the min scaffold length for the statistics? The default seems to be >10kb. I would like to get the lengths >1kb.

Thanks,

Michael

assembly genome • 305 views
ADD COMMENTlink written 21 months ago by catto.michael20

Default option for making fasta from assemblies is 1 kb (--minsize=N). See this page.

ADD REPLYlink written 21 months ago by GenoMax96k
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