Question: Supernova run 1kb+ min scaffold
1
gravatar for catto.michael
11 days ago by
catto.michael20 wrote:

Hi,

Does anyone know what flag to use to set the min scaffold length for the statistics? The default seems to be >10kb. I would like to get the lengths >1kb.

Thanks,

Michael

assembly genome • 78 views
ADD COMMENTlink written 11 days ago by catto.michael20

Default option for making fasta from assemblies is 1 kb (--minsize=N). See this page.

ADD REPLYlink written 11 days ago by genomax68k
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