Question: List of tools that use BED as input
1
gravatar for jnjeffrey2
7 months ago by
jnjeffrey210
jnjeffrey210 wrote:

Dear everyone,

I am working on compiling a list of all tools/software on Bioconda that use the BED file format as input. The tool doesn't have to only use BED as input, but can use BED in conjunction with other types such as BAM or VCF as well.

I have started a Google Sheet here with what I've found so far. Any suggestions here or comments on the Google Sheet would be amazing.

Thanks a lot for your help!

bed • 200 views
ADD COMMENTlink modified 7 months ago by Pierre Lindenbaum125k • written 7 months ago by jnjeffrey210
2
gravatar for Pierre Lindenbaum
7 months ago by
France/Nantes/Institut du Thorax - INSERM UMR1087
Pierre Lindenbaum125k wrote:

using elixir: https://bio.tools/t?inputDataFormatID=%22format_3003%22

ADD COMMENTlink modified 7 months ago • written 7 months ago by Pierre Lindenbaum125k
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