Question

Access 1000 Genomes non-imputed data set

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4.8 years ago

aadhirareddy1323 ▴ 50

Hi All,

May I know if 1000 Genomes non imputed data set is available ? I want to download the VCF files.

Thank you

1000Genomes VCF • 981 views

ADD COMMENT • link 4.8 years ago by aadhirareddy1323 ▴ 50

score 0 · Answer 1 · 2019-07-02

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4.8 years ago

Kevin Blighe 87k

The releases are available here: ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release

I believe the most recent release, 20130502, contains imputed calls; whereas, the one prior to that, 20110521, does not. Double check in the README files.

Kevin

ADD COMMENT • link 4.8 years ago by Kevin Blighe 87k

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Thank you. I will check

ADD REPLY • link 4.8 years ago by aadhirareddy1323 ▴ 50

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The ones in directory '20110521' should be the non-imputed calls.

ADD REPLY • link 4.8 years ago by Kevin Blighe 87k

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Thank you so much

ADD REPLY • link 4.8 years ago by aadhirareddy1323 ▴ 50