I run the program cuffmerge "to create a single merged transcriptome annotation" and I got a file "merged.gtf" with lines like:
1 Cufflinks exon 31556 31607 . + . gene_id XLOC_000001; transcript_id TCONS_00000001; exon_number 1; gene_name GOLGB1; oId CUFF.2.1; nearest_ref ENSGALT00000081071; class_code j; tss_id TSS1;
This is a row of cuffmerge output.
What is the concept of each title?
Thanks a lot