I install the bioconductor packages for installing the IsoformSwitchAnalyzeR in R but it didn't install. it shows error like - ------------------------- ANTICONF ERROR --------------------------- Configuration failed because libcurl was not found. Try installing: * deb: libcurl4-openssl-dev (Debian, Ubuntu, etc) * rpm: libcurl-devel (Fedora, CentOS, RHEL) * csw: libcurl_dev (Solaris) If libcurl is already installed, check that 'pkg-config' is in your PATH and PKG_CONFIG_PATH contains a libcurl.pc file. If pkg-config is unavailable you can set INCLUDE_DIR and LIB_DIR manually via:
R CMD INSTALL --configure-vars='INCLUDE_DIR=... LIB_DIR=...'
ERROR: configuration failed for package ‘curl’ * removing ‘/home/aclab/R/x86_64-pc-linux-gnu-library/3.6/curl’ ERROR: dependency ‘curl’ is not available for package ‘httr’ * removing ‘/home/aclab/R/x86_64-pc-linux-gnu-library/3.6/httr’ ERROR: dependency ‘httr’ is not available for package ‘biomaRt’ * removing ‘/home/aclab/R/x86_64-pc-linux-gnu-library/3.6/biomaRt’ ERROR: dependency ‘biomaRt’ is not available for package ‘DEXSeq’ * removing ‘/home/aclab/R/x86_64-pc-linux-gnu-library/3.6/DEXSeq’ ERROR: dependency ‘DEXSeq’ is not available for package ‘IsoformSwitchAnalyzeR’ * removing ‘/home/aclab/R/x86_64-pc-linux-gnu-library/3.6/IsoformSwitchAnalyzeR’
I use following command in R- 1- if (!requireNamespace("BiocManager", quietly = TRUE)){ install.packages("BiocManager") BiocManager::install() } 2- BiocManager::install("IsoformSwitchAnalyzeR")
