News: Programming with Bash and Python
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gravatar for carlopecoraro2
12 months ago by
carlopecoraro21.8k
Berlin
carlopecoraro21.8k wrote:

Dear all,

the registration deadline for our course "Introduction to Bionformatics", held at Free University Berlin, is soon approaching (14th September).


Instructor: Dr. Martin Jones (founder, Python for biologists).


The course aims to provide an introduction to the field of bioinformatics, with a special focus on teaching the basics of programming computers using a combination of Bash and Python. Attendees will learn how to arrange tools into pipelines which can be executed with minimal supervision. The course aims to use a combination of theoretical and practical sessions in order for participants to gain practical experience in using various tools and resources.


Monday 14th – Classes from 09:30 to 17:30

Session 1 – connecting to the server and basic Linux commands

Session 2 – assembling Linux commands into pipelines


Tuesday 15th – Classes from 09:30 to 17:30

Session 3 – introduction to bash scripting and variables

Session 4 – flow control in bash, aliases and paths


Wednesday 16th – Classes from 09:30 to 17:30

Session 5 – introduction to Python, text and files

Session 6 – lists and loops in Python


Thursday 17th – Classes from 09:30 to 17:30

Session 7 – conditions in Python

Session 8 – writing functions in Python


Friday 18th – Classes from 09:30 to 17:30

Session 9 – paired data and dicts in Python

Session 10

The afternoon of Friday 18th is reserved for finishing off the next-gen workflow exercise, working on your own datasets, or leaving early for travel.


For more information, please see: https://www.physalia-courses.org/courses-workshops/curriculum/course1/


For the complete list of our courses and Workshops, please see: https://www.physalia-courses.org/courses-workshops/


Should you have any specific questions, feel free to contact us: info@physalia-courses.org

bash unix programming news python • 316 views
ADD COMMENTlink written 12 months ago by carlopecoraro21.8k
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