the absent genes in GWAS
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4.6 years ago

in GWAS for bacteria, how we can asses the SNPs that are located within a gene region if that gene is absent in some samples? do we exclude these samples from our association study? or we assume these loci as a reference? Could you please advise me.
snp genome sequence gene • 603 views
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Hey, what do you mean by 'absent in some samples'?

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