I followed this tutoral (https://icb.med.cornell.edu/wiki/index.php/Elementolab/BWA_tutorial) to installed BWA (bwa-0.7.17.tar) on my Mac. After I did everything
(till "execute the command", ~/.bash_profile), BWA still couldn't be run. When I type bwa, it shows
"-bash: bwa: command not found".
the use path for the Terminal is:
(base) mean-machine:bwa-0.7.17 Admin$ echo $PATH /Library/Frameworks/Python.framework/Versions/3.7/bin:/Library/Frameworks/Python.framework/ Versions/3.7/bin:/anaconda3/bin:/anaconda3/condabin:/Library/Frameworks/Python.framework/Versions/ 3.7/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/Users/Admin/Library/Python/3.7/bin://Users/Admin/Desktop/BWA/bwa-0.7.17://Users/Admin/Desktop/BWA/bwa-0.7.17source:/Users/Admin/Desktop/BWA/bwa-0.7.17:/Users/Admin/Desktop/BWA/bwa-0.7.17
It looks lots of repeats exist in my terminal PATH. I'm not sure if that's the reason I can't run BWA?
Can someone guid me to correct the problem? Thanks