Finding out gi number (Gene accession) from KO (KEGG orthology) numbers
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21 months ago
anis.geb.cu ▴ 10

I have 711 essential proteins list of Streptococcus pyogenes MGAS5005 that are predicted by ePATH web server that only provides KO (KEGG ortholog) numbers (along with gene name and gene function) as protein identifier. But I need to find out the gene accession numbers of those proteins. Is there any convenient way to do this?

Gene accession numbers KEGG ortholog dataset • 543 views
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Can you provide examples of KO numbers?

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K01191 K11618 K01035 K05366 K01000 K14227 K14223 Please consider these seven numbers as examples.

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21 months ago

Hi,

I think this might help you : https://www.uniprot.org/uploadlists/

Good luck

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This may require two steps. If it works. KEGG --> Uniprot --> NCBI Accession.

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