I have the following gene enrichment from a ChIP-seq experiment. The highest p-values are not from the GO database, but from other databases like COSMIC, BIOCYC, MSigDB etc.
Is there any software similar to AmiGO and QuickGO that I can use to visualize the directed acyclic graphs (DAG)?
Is it even possible to create DAG with enrichment from different databases? Would be super grateful if someone could point me in the right direction!
Thanks so much!
Here is an example of my results:
Database | TermID
COSMIC | angiosarcoma
COSMIC | blood_vessel
COSMIC | soft tissue_haemangioma
MSigDB | DACOSTA_UV_RESPONSE_VIA_ERCC3_DN