Ignoring copy number when calculating VAF
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17 months ago
A ★ 3.9k

Hi

I was trying to use Variant Allele Frequency (VAF) to analyse tumour heterogeneity but I saw basically I have no copy number neutral variants

In this situation what is the solution? Can I trust VAF ignoring my CN data?

Thank you for any information

r copy number variant allele frequency • 445 views
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