Question: How to plot a bed file with CNV events?
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gravatar for reui879
4 months ago by
reui87910
reui87910 wrote:

I'm trying to plot a heatmap similar to this in R using complexHeatmap or pheatmap but with cell_id on the Y axis and white spaces where the there are gaps between genomic regions. I have this bed file. I'm hoping to have the genomic regions on the X axis with the chromosomes labelled.

https://pastebin.com/cMQK4qRj

https://i.stack.imgur.com/u9iDr.png

heatmap R • 139 views
ADD COMMENTlink written 4 months ago by reui87910

Please use: How to add images to a Biostars post

ADD REPLYlink written 4 months ago by genomax86k
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