Question: NGS data repositories for COVID?
gravatar for rh5118
9 months ago by
London, UK
rh511840 wrote:

Hi Biostars!

Anyone know if there are publicly available immune repertoire/BCR sequencing or phage display datasets for COVID? Not sure if this is the appropriate forum for this question - but we have some analytic tools and machine learning approaches that would greatly benefit from a relevant dataset.

Cheers, en avance!

ADD COMMENTlink written 9 months ago by rh511840
gravatar for GenoMax
9 months ago by
United States
GenoMax94k wrote:

If you search NCBI SRA using sra-explorer (LINK) using SARS-CoV-2 there are 450+ datasets that show up. That is the extent of currently available public datasets related to this virus. Add additional search terms to limit results as needed. You will need to keep checking in, if you don't find what you are interested in.

ADD COMMENTlink modified 9 months ago • written 9 months ago by GenoMax94k
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