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4.1 years ago
ys19f
•
0
Hi, I have the junctions track for HiSat2 alignment in Geneious, but how can I determine which junctions are best supported by the reads?
not aware of the specific details of Geneious but if it reports a junction it should be supported by (at least one) reads.
It should be a binary situation: it either reports the junction (and then it is supported ) or not.
How would you (theoretically) determine better or worse supported junctions?