Question: How to read the Fastq files?
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gravatar for kristinadobrovolskaa3
9 months ago by
kristinadobrovolskaa30 wrote:

Hello, i need to make my bioinformatic school project. To do this i have to find a mutation in a sequence file. But i don't understand how to read the Fastq files. Could you recommend me some programms? Maybe i shoult convert Fastq to Fasta format? But i don't know how.

sequence • 168 views
ADD COMMENTlink written 9 months ago by kristinadobrovolskaa30

School like high school? Please add some details about the actual task. Variant calling is nothing you "just do" as a side project given no background knowledge.

ADD REPLYlink written 9 months ago by ATpoint44k

Did you even google it ? There are thousands of ressources on how to read a FASTQ file. Then, as ATpoint mentioned, it's a whole different question if you need help to do variant calling...

ADD REPLYlink written 9 months ago by nlehmann110
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