Question: an problem occuring when using fastq_quality_filter
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543541656 • 20 wrote:
how can i sove the problem when i execute the following command?? gunzip -c 9311/9311_2.Rn.1.gz | fastq_quality_filter -Q 33 -v -q 30 -p 90 -z -o 9311/q30p90/9311_2.RnFq30p90.1.gz Segmentation fault (core dumped)
fastq_quality_filteris probably not able to read from a pipe|STDIN. You can usereformat.shfrom BBMap suite. A guide is available here.