How to test transposition in BAM files?
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12 months ago

Hello,

is there a good pipeline for the analysis of transposition using WGS data? In other words, that is the procedure to assess whether a transposon has jumped between one sample and another?

Thank you

Assembly sequencing trasnposition • 225 views
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I think you need to explain a bit more in detail what exactly it is you're looking for and what type of data you have.

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These seem promising, I'll read them, thank you.

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This seems like a very fitting (and very recent) publication, too:

"Mobile Genomics: Tools and Techniques for Tackling Transposons"

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