Question about the parameter -fs in bedtools.
0
0
Entering edit mode
3.9 years ago
Spencer ▴ 20

Hi, i have recently learned Bedtools,but i'm not totally understand the parameter -fs. For example,in the chip-exo pipeline in order to generate stranded read counts trim 1,using -fs. Code as following: bedtools genomecov -ibam bamfile -fs 1 -d -strand + bedtools genomecov -ibam bamfile -fs 1 -d -strand - So what exactly does it do?

Thanks.

bedtools • 667 views
ADD COMMENT

Login before adding your answer.

Traffic: 2205 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6