GSEA help! Error at index 0
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Entering edit mode
3.9 years ago

Hi All

I am trying to run GSEA preranked on a ranked DEG list. I am choosing Wnt/bcatenin Hallmark gene subset database and keep getting the following error message.

Error Details

---- Full Error Message ----
Error at index 0 in: "\pub\gsea\gene_sets\h.all.v7.1.symbols.gmt"

The error message doesn't come up when i use the gene matrix database (from website), but only when i use gene subsets.

Thanks
A

RNA-Seq • 856 views
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