Question: sc-ATAC pro downstream analysis in R
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gravatar for sidrah.maryam
13 days ago by
sidrah.maryam0 wrote:

During the downstream analysis of the data produced, available on: https://scatacpro-in-r.netlify.app/downstream_in_r In the step TF motif enrichment analysis, the second line :

chromVar.obj = readRDS(paste0(down_dir, '/chromVar_obj.rds'))

this error shows up "Error in if (len > 1) paste(len, " elements, ", sep = "") else "" : argument is of length zero"

Please suggest the reason and a solution for the same. Thanks

sequencing chip-seq R gene • 85 views
ADD COMMENTlink modified 2 days ago by Biostar ♦♦ 20 • written 13 days ago by sidrah.maryam0

This protocol

scATAC-pro

ADD REPLYlink modified 13 days ago • written 13 days ago by sidrah.maryam0
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